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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94412451
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTATAVVPRN APSSSAFPRA SRLSCSVRAA LLSLAMAAGA APLCASAAEV VAERARPYAI  60
   61 PAGELGEVLN RFAREAGITL SATPAQTGGY SSQGLRGSFT VQQGLARLLA DTPLEAEDQG 120
  121 DGSFVLREAP AKDGDVLNLQ AVEVFALGNN LGSTDGYLAT HSQIATKTSK PLLETSQTVS 180
  181 VITREQIDDT ASRTVQQAMR YTPGIFTGQV GASNRYDYVV MRGFADNSVD NIYLDGLKAM 240
  241 GDSGTYSSMQ VDPYFLERID VLKGPSSVLY GRSLPGGLVA LTSKKPLYED YHQVTASVGN 300
  301 MGQKSMGFDF SGPLDEEKRI AYRVVGLGKG SDTQFDHVKE ERYAIAPTLA IDFSDDTTLT 360
  361 LQGYLQHDPN GGYHGGVPAD GTLSHHNGRH ISREFFDGEP GKDDFDRTQR MFGYQLEHRI 420
  421 DDVWSARQNF RYLDSDVDLS QVYAYGWSAS EPNKLNRYFT GAREHLQAYI VDNMLQAEFA 480
  481 TGAARHTLLT GLDYQRRRTV VDWRSGAASA LDAFNPVYGD DAISYYPDDN HTRRLEQTGV 540
  541 YLQDLIDIDQ WRFSVGLRQD WVSVTDKNRS SGTKADDDWK KFTGRIGALY LFDNGLAPYV 600
  601 SYSESFNPNA YSDASGTPLE PTEGKQWELG LKFQAPGSNS FYTASLFHIT QENVASKEPQ 660
  661 DNFYTSVGEV RSQGFELEAH TQLSDNLKLL GSYTYTDITY TKSLDGNQGH TPNQAPKHMA 720
  721 SLWADYAFDA GPLSGLSIGG GARYVGETWA DKENTLRVPD YTLVDARIGY DLGKLGLKGL 780
  781 DVSLNANNLL DKDYVASCYS LDFCYFGEKR NVTATVNYQF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle