YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|98663078
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLITGREKM GKRYLVTGGA GFIGSNFIIY LLTKYENCIV INLDKLTYAG CLENLAAIKD  60
   61 SPRYQFYKGD IADKELVGKI LAGGIDVIVN FAAESHVDRS IHDPGIFVKT NVLGTQVLLD 120
  121 GALKFGIKKF VQISTDEVYG SLGASGYFRE DMPLCPNSPY SASKAAADLL VHAYRHTFGL 180
  181 NVNITRCSNN YGPYQFPEKL IPLMITNALE DLPLPVYGDG LNVRDWLHVK DHCAAIDCVI 240
  241 ENGRPGEVYN IGGNNEKTNL EIVKTILRIL GKNENLIKFV KDRPGHDRRY AIDAGKIMKE 300
  301 LGWMPEYSFE QGIQSTIEWY IKNEAWWKRI KSGEYKEYYQ KMYNDLF

Type	Start	End	Confidence
Cytoplasmic	1	13	0.78
Transmembrane Helix	14	33	0.82
Non-Cytoplasmic	34	347	0.99