YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|98662899, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYRFSRLLC RIILALLRRW QVRGAENMPS SGGMVVVSNH ISYWDPVVVG CAFDRQIYFM  60
   61 AKSELFDIPL LGPVIRALGA FPVRRDRSDR KAIRTAIRLL EEGNIIGIFP EGTRSYTGEI 120
  121 LPPHMGAAML AFKAGVPILP VAVSGTRGIF GKVRVKVGKP FYCQTGTKAG KTELEKASKE 180
  181 VMSRIAALLD DIMRGNS

Type	Start	End	Confidence
Signal Peptide	1	24	0.92
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	197	0.95