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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|98662587
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPTSNIQVS IIIENICLSK SHIAYFIVRT CKGEKRLANK KIKKRKLNIY RLAFFLLCVA  60
   61 LLIAGGTGIG LVFASVRDMP VLNPSVLESG ASTMIYDKDG NLVTQIGIKN SVPVDLKEVP 120
  121 EHVRNAFLAI EDPGFYEHHG ISLRGIARAA WSDITSRSIR EGGSTITQQL VKISFLSPER 180
  181 TLKRKIQEVI LAFQVERRYT KDEILEMYLN NIYLGEGAYG IQAAAQTYFG KNVGELELEE 240
  241 AALLGGLPQA PSAYSPYRDP QAALERRNTV LDSMARRGFI DESQAKKAKA REIKLETKEP 300
  301 AERQYPYPYF LDYVTDKLIE KYGEAEVFKG GLKVYTSLDQ KIQQAAEAAM ARNANFPPSK 360
  361 TDANGLLQPQ GAVVVLDPHT GYIKALVGGR EHTQKRQWNR ATQATRQPGS AFKPIAAYGP 420
  421 AIEYKGMGPA SVVDDIPVKY GSYEPKNYDG RYRGLITLRT ALTHSVNVAA VKLLADSVGI 480
  481 DAAVRFASGL GINLDPSVHG ASMALGGLHN GVSPLQMAGA YAAFANQGVY IEPTAIVKVE 540
  541 KQDGVILDQP VPKHHQAMKA TTAYLVTDML KSVVQSGTGS GAQIGRPAAG KTGTTDDGKD 600
  601 IWFVGYTPEL VAAVWIGYDQ PAAMPQAYGG TYPARIWREI MSKALSNEPV KDFPRPSGLI 660
  661 TATVDGKSGL LPGPNTPGDA LVTDLFAEGT VPSETDNVHV FMEVCAASGQ LPNEYCPDRV 720
  721 IKPLIKLPYS VPSFVEDFNQ RAPKEYCTLH GPGAARNQPG PANQLNPAIP GTTGPQPDIP 780
  781 TGQTKQPGQE NKDKRGSENR RNP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle