YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|98662205, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRKKQGQSQ KSGKAGHERW LLTYSDLITL LMIFFVVMYS LSSINARKFK AIAMSLASAM  60
   61 GGGQSVMTEP GASLAPGVSG SSLPADLGQA AAEAADLESL RRELQEYIEQ NGLTGRVSVN 120
  121 LEERGLVLSF LDVALFPLGS ARLTPEAQET VGKIGKILLK APNYIRVEGH TDNLPINTRE 180
  181 FPSNWELSVA RATSVVQELI HKLNFPPERL SATGYGEFRP RMPNDSAEHR QQNRRVDLVI 240
  241 LRSKYETAEP MAVKP

Type	Start	End	Confidence
Cytoplasmic	1	19	0.94
Transmembrane Helix	20	41	0.92
Non-Cytoplasmic	42	255	0.83