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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|98662163
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVSFFYAIL IDIIGLAERN KMEHLQPEYN WYSLDTDEIC QKLGTNTVRG LDLNEAAIRL  60
   61 KNYGPNVLQE KPPRSLLSMF IAQMKEILVV ILIAAAVISG FLGEWEDSIV IIAIVILNGA 120
  121 IGTFQENKAE NALKALKELT RPFAKVIRGE KVLQINAGEV VPGDLILVEA GDLVPADARL 180
  181 IESSSLQTSE AALTGESLPV EKESAVIKAH QVPLGDRKNM LFMGTTVTGG RGKAVVVATG 240
  241 MKTELGRIAQ LLDEAVPETT PLQQQLEKVG KTLGVFALVI VALVFCMGLW RGEYLPEMFM 300
  301 IAISLAVAAV PEGLPAVVTI VLALGVTRMS RRNAIIRKLP AVETLGTATV ICSDKTGTLT 360
  361 RNEMTVTRIY VADKIYEVTG NGYVPAGKIL EQNGSEVTQL SDDESLELLI AGGLLNNNAE 420
  421 LEDTGNGHRV IGDPTEGALV VVAAKAGLSR KTAGKKYPRL AEIPFDSIRK MMTTFHRAEG 480
  481 GIRSFTKGAP DVLLRRCSGV LTRTGIIDLH EETRMKLIKI NSQLASQGQR ILALATRFWP 540
  541 AMPANLSPET IEQDLVFVGF FAITDPPRPE AREAVELCRR AGIRTVMITG DHRETAEAIA 600
  601 RELSILQPGD HILTGEQLDR MSEEELKHAA NRVAVYARVS PEHKLRIVEA LKHHGHIVAM 660
  661 TGDGVNDAPA LKRADIGASM GISGTEVAKE ASDMVLLDDN FVTIVKAVEE GRTIYNNIRS 720
  721 SIHYLLSCNA GEIVAIFSSL LLGLGSPLSP IQILWLNLVT DGPPALALGL EPPRKGIMNK 780
  781 PPRKPKESLF SGGVGIKILW QGAIIGLASL VAYWLAFRWG RPLEEARTIT FLTMSMSQLI 840
  841 HSFNARSLEQ SLFTIGPFSN RSLVLALAAS LTALLAVIIV PFLRNVFETA MPRPSDWVVV 900
  901 LSLSIMPLVL VEAGKLAGRL SRHRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle