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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|98660144
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQYSLWVVL TDFLRGVAFL NKVVKNLSIY LLIVLVIIAM IKYTAPAKNV PLSMTYSKFY  60
   61 EDLNQGQIKK VVIQSENLTN IITGEKKDGT KFETKGPAAD AELYSLLKEK KVEWQSELPP 120
  121 QPGWWTSLLT TLLPIILFVV LFFFLMQQTQ GGGNRVMSFG KSRARLHTDD KRKVTFADVA 180
  181 GADEVKEELE EIVEFLKNPK KFQELGAKIP KGVLLFGPPG TGKTLLARAV AGEAGVPFFS 240
  241 ISGSDFVEMF VGVGASRVRD LFDQAKKNSP CIVFVDEIDA VGRQRGAGLG GGHDEREQTL 300
  301 NQLLVEMDGF SPNEGIIILA ATNRPDILDP ALLRPGRFDR QVVVDAPDVN GRKEILKVHM 360
  361 RGKPIDESVN LEVLARRTPG FTGADLANLT NEAALLAARQ NRKKITMADL ENSIERVIAG 420
  421 PEKKSKVISE KEKWLVCYHE AGHAVVGYLL PNTDPVHKVS IIPRGRAGGY TLLLPKEDRY 480
  481 YATKSQLLDQ VTMLLAGRVA EQVVLKEIST GAQNDLERST DIVRKMVMEY GMSDLGPMTY 540
  541 GRKQDTPFLG RDLARDRNYS EEVANAIDVE VRQTIDRSYN KAKELLEQHM ETLHLVARTL 600
  601 FEKETIEAEE FAELMKKAGE IERQDRVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle