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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NBN_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKLLPAASA APGEPCRLLA GVEYIVGRKN CAILIENDQS ISRNHAVLRV NFPVTSLSQT  60
   61 DEIPTLTIKD NSKYGTFINE EKMQNGLSST LKTGDRVTFG VFESKFRVEY EPLVVCSSCL 120
  121 DVSGKTVLNQ AILQLGGLTA NSWTEECTHL AMSSVKVTIK TICALICGRP IVKPEYFSEF 180
  181 LKAVESKTQP PEIESFYPPI DEPAIGNKSV DLSGRRERKQ IFKGKTFVFL NAKQHKKLGS 240
  241 AVVFGGGEAR LMAEGGEEEQ SFFSAPGTCV VDVGITNTQL IITDSQRKWI HLIMDILQRH 300
  301 GLRPIPEAEI GLAVIFMTTE SYCNPQGQPC TEVKTTTPGP SLSQGLSANG KVIPSAPMNM 360
  361 TTYVADTESE PADTCMSLSE RPEEVKIFGL DQNSRKLLQG TCNIKETSNQ SSNSNNAASN 420
  421 TLVRGKAPNY QLSPMKCPAA SKNKDWSSQQ QLNSIKNYFQ PCSRKRERDE ENPEQSSCKS 480
  481 SRVELSCSLL EQTQPAGPSL WKSKDHESQS ETLDRASNAS SVGGIDIKPN GKSPDSKSFS 540
  541 TEDLRARKRK EVDLSTEEEV LEELLRSTKP ELAVQVKVEK QEADVSIRKK PRMDAERNQH 600
  601 LNGGPVPESN SALQEDETGK KDELQIEAWS TKREVSNTDE LQDSSEELPR KLLLTEFRSL 660
  661 VVHNNSSRNL CVLNGRGELK NFKKFKKATC PGAGKLPHII GGSDLIGHHA RKNTELEEWL 720
  721 KHEMEVQKQQ AKEDSLADDL FRYNPNVKRR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle