YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CASB_HORSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILILACLV ALALAREKEE LNVSSETVES LSSNEPDSSS EESITHINKE KLQKFKHEGQ  60
   61 QQREVERQDK ISRFVQPQPV VYPYAEPVPY AVVPQSILPL AQPPILPFLQ PEIMEVSQAK 120
  121 ETILPKRKVM PFLKSPIVPF SERQILNPTN GENLRLPVHL IQPFMHQVPQ SLLQTLMLPS 180
  181 QPVLSPPQSK VAPFPQPVVP YPQRDTPVQA FLLYQDPRLG PTGELDPATQ PIVAVHNPVI 240
  241 V

Type	Start	End	Confidence
Signal Peptide	1	15	0.99
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	241	0.99