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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AGC1_ASHGO
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSSASTVK KKRQLAIFNA YATPLRQDER RLRASYEHGG VVGGHVASNE KVLLFDDFVD  60
   61 LISNSRSFYS KFTDHCFNLN QIPNTVFGCI FFAIDENNKG YLNVNDWFYF NNVLEYDNYH 120
  121 FIILYEFFRK FDAARERAYG PSVKSINYGN RFLSFDELYL DLEQFQATLR LLHSCVRDDF 180
  181 IVNNKLFLDW KQFRWLKWYQ FYPRGLLQNG PHITLNSLIS IVQNDLKSEK LLLGFHCLSQ 240
  241 LDHRTNSMTI SKNQLVYLMR LFYSHKIPAD IFNSLNMSTL SCAKCDNNHI NYNVFRDLFY 300
  301 LIQNFDLLNQ IVHRYAEVHK FSDRDVREQH ISRKDLLRFM NTEYNKINNI IEFSPAQISL 360
  361 LFSIVTNSKK LNYLNNARQN NPELSYHHRD SEIDSFIHNE YINGNAASSL HNESLEKFND 420
  421 DFENIIQADA GDTKQQISST DWRSVFSWSS FLSSFEWLHF KKRKSVQTNG LSDEYVNEAL 480
  481 TLEDIMKIVN PNYLNDLVHH MELRRIESES RSSNLYFYPI FDSIYNFTLG SVAGCIGAMV 540
  541 VYPIDMVKTR MQAQRDFSKY KNSIDCLLKI LSKEGVRGLY SGLGPQLIGV APEKAIKLTV 600
  601 NDHMRATLAG RDGKLSLPCE IISGATAGAC QVVFTNPLEI VKIRLQVKSD YVADAARNSV 660
  661 NAISVIKNLG LIGLYRGAGA CLLRDIPFSA IYFPTYAHIK SNVFNFDPKD SDKRNKLNTW 720
  721 QLLVSGGLAG MPAAFLTTPF DVIKTRLQID PKKGESVYNG IWDAARTILK EEGIKSFFKG 780
  781 GPARVLRSSP QFGFTLAAYE IFHNLFPAPR YDDSTTHRPT REPVGALAPI NKTVSAFFPD 840
  841 QLEPHVGNNK WASRLYGPNI DPYSSSFLNY YYKSCQVAKA FMDLDYNFAH FDFNTYQQFH 900
  901 DELNAMKNKK H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle