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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46981406, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVPKNTPLV VFLAFFSLTE GLQRAPRITT LLETVDSSLD HNATFICEVD SYPQADIIWT  60
   61 RNNYPIRYYD SRYVIQENGQ MLIIPNVKDS DSGEYCCIAN NGVGEAKSCG ALQLKMKPQI 120
  121 KRHPTNMTLI LESKAVLPCL SLGYPKPEIS WIKEDDLIKA NNRIAILESG SLKITNIKKE 180
  181 DAGQYRCVAR NSFGIAFSRP VTIEVQAPAK ILKVPKEKRV QIGSEVTLEC NATGNPIPSI 240
  241 TWLENGNTIS GASVVETLVG EVILSVLQVV VHKPALYTCQ ATNRHSGGEN TVKATAKITV 300
  301 SEWRLYKGHA GYCSTYRGDV CRNVLRRDAL VFFNYSLPNP EDAQEYLAQS AWPELDGVSS 360
  361 FCRPAARSLL CHSTFQDCNP SGLGPAPKPV CREHCLTVKE LYCYKEWRSA EERSQRGFQH 420
  421 ITLPECTSLP SQQADPSSCT AVPYVDIKKD QVTSTCYNDK GRFYQGTHNV TASSIPCQRW 480
  481 NQQDPHQHRL SVDVIPELRN AENYCRNPGG ESDRPWCYTT NPNVRWEYCL VPKCGEVISI 540
  541 RTAPSITKPA HFYPPPSVST AYSMSVIIFV IAGFAGAAFF TVLILMCHRR KKMWKKRKSR 600
  601 VLETPTLTTL PSELLLDRLH PNPMYQRLPL LLNSKLLSLE YPRNNIEYVR DIGEGAFGRV 660
  661 FQARAPGLLP TEPFTMVAVK MLKEEASTDM QNDFQREAAL MSEFDHPNIV RLLGVCAVGK 720
  721 PMCLMFEYMA YGDLNEFLRR RCATQQPSLS RDTLTSSSLV SEPERYPPLS CQEQLSISKQ 780
  781 VAAGMAYLSE RKFVHRDLAT RNCLVAENLV VKIADFGLSR NIYAADYYKA SENDAIPIRW 840
  841 MPPESIFYNR YTSESDVWAY GVVLWEIFSY GMQPYYGMAH EEVIYYVRDG NVLSCPENCP 900
  901 QELYNLMRLC WSGHPTDRPS FASIHRILER MHDQMLKSGL S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle