YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57232107
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METNSVSKLC LFLGLVCFLG FQLVQCTVTY DRRAIVINGQ RRILISGSIH YPRSTPEMWE  60
   61 DLIQKAKDGG LDVVETYVFW NVHEPSPGNY NFKGRYDLVR FLKTIQKAGL YAHLRIGPYV 120
  121 CAEWNFGGFP VWLKYVPGIS FRTDNEPFKR AMQGFTEKIV GLMKSEKLFE SQGGPIILSQ 180
  181 IENEYGAQSK LFGAAGHNYM TWAANMAVGL GTGVPWVMCK EEDAPDPVIN TCNGFYCDSF 240
  241 APNKPYKPTI WTEAWSGWFS EFGGPIHQRP VQDLAYAVAR FIQKGGSFVN YYMYHGGTNF 300
  301 GRTAGGPFIT TSYDYDAPLD EYGLIRQPKY GHLKELHRAI KMCERALVSA DPIITSLGNF 360
  361 QQAYVYTSES GDCSAFLSNH DSKSAARVMF NNMHYNLPPW SISILPDCRN VVFNTAKVGV 420
  421 QTSQMGMLPT NIQMLSWESY DEDITSLDDS STITAPGLLE QINVTRDSTD YLWYKTSVDI 480
  481 GSSESFLRGG ELPTLIVQST GHAVHIFING QLSGSSFGTR ESRRFTYTGK VNLHAGTNRI 540
  541 ALLSVAVGLP NVGGHFEAWN TGILGPVALH GLDQGKWDLS WQKWTYQVGL KGEAMNLVSP 600
  601 NSISSVDWMR GSLAAQKQQP LTWHKTLFNA PEGDEPLALD MEGMGKGQIW INGQSIGRYW 660
  661 TAFANGNCNG CSYAGGFRPP KCQVGCGQPT QRVYHVPRSW LKPMQNLLVI FEEFGGDPSR 720
  721 ISLVKRSVSS VCAEVAEYHP TIKNWHIESY GKAEDFHSPK VHLRCNPGQA ISSIKFASFG 780
  781 TPLGTCGSYQ EGTCHAATSY SVLQKKCIGK QRCAVTISNS NFGDPCPKVL KRLSVEAVCA 840
  841 PIVSTTMEPN SRG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle