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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57114406
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPFCCVPPV PVSPAASAAA AATPAASSAV AGAPAVMPPP PPPLPPPPPR SNSAPPERRA  60
   61 LRWAAGGGSG GGNSPPEGVK LNEIVGGGIS GILYKWVNYG RGWRPRWFAL HDGVLSYYKI 120
  121 HGPDRIVLSR ETERGAKVIG EDSLRRLSRP STSSSSSAHS NGHHLPRKPI GEIHLKVSSV 180
  181 RESRSDDRRF SIFSGTKRLH LRAETREDRA AWVEALQATK EMFPRMSTSE MVGPGDTAAA 240
  241 VAVSTERLRQ RLQQEGVSEA AIADSERIVR TEFEVLHKQL MLLKQKQTLL LDTLRQLETE 300
  301 KVDLENTLVD ESQRQSKEYG STSRSKNEKY SEGSASESDD YNEPQDPAED ETDDDENIYF 360
  361 DTRDFLSSSS FKSSGSDFQR SEAGSDDEDD YPMDGIDTSM KSVGISYPYV RRRKKLPDPV 420
  421 EKEKGVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLID RAYEWGKRGN 480
  481 SLMRILSVAA FAVSGYASTD GRSCKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC 540
  541 HCEGTGWRFW ADSNLKSKFW GRSIQLDPVG VLTLEFDDGE VFQWSKVTTS IYNLILGKLY 600
  601 CDHYGTMRIQ GNNEYSCKLK FKEQSIIDRN PHQVQGVVQD RSGRTVATLF GKWDESMHYV 660
  661 MGDCFGKGKG SENFSEAHLL WKRSKPPKFP TRYNFTRFAI TLNELTAGLK EKLPPTDSRL 720
  721 RPDQRCLENG EYERANAEKL RLEQRQRQAR KMQESGWKPR WFAKDKATDT YRYLGGYWES 780
  781 REKGSWEGCP DIFGQVPNDL MITD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle