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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52854796
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITHGCYTRT RHKHKLKKTF VMLSAGLGLF FYVNQNSFAN GENYFKLSSD SKLLTQNAAQ  60
   61 NRLFYTLKTG ETVADLSKSQ NINLSTIWSL NKHLYSSESE MMKAAPGQQI ILPLKKLPVE 120
  121 YSALPHLGSA PVVAAGGVAG HTNKMAKMSP DMTKSNMTDD KALNYAAQQA ASLGSQLQSR 180
  181 SLNGDYAKDA ALGMAGNQAS SQLQAWLQHY GTAEVNLQSG NNFDGSSLDF LLPFYDTEEM 240
  241 LAFGQVGARY IDSRFTANLG AGQRFFLSEN MLGYNIFIDQ DFSGDNTRLG IGGEYWRDYF 300
  301 KSSVNGYFRM SGWHESYNKK DYDERPVNGF DIRFNGYLPS YPALGAKLMY EQYYGDNVAL 360
  361 FNADKLQSNP GAATVGVNYT PVPLVTMGVD YRHGTGNEND LLYSMQFRYQ FDKPWSQQIE 420
  421 PQYVNELRTL SGSRYDLVQR NNNIILEYKK QDILSLSIPH DINGTEHSTQ KIQLSVKSKY 480
  481 GLDRIVWDDS ALRSQGGQIQ HSGSQSAQDY QAILPAYVQG GSNIYKVTAR AYDRNGNSSN 540
  541 NVQLTITVLS NGQVVGQVGV TDFTADKTSA KADNADTITY TATVKKNGVA QANIPVSFDI 600
  601 VSGDATLSAR SATTNSSGKA TVTLKSSKPG QVVVSAKTAE MTSALNANAV IFVDQNKASI 660
  661 TEIKANKTTA VANGKDAVTY TVKVMKNGQP VSNQEVAFTT TFGNLSNSAG KTDTDGYAKV 720
  721 ILTSTTPGKS LVSARVRDVA VDVKAPEVEF FTSLAIDDSN VEIVGTGIKG KLPTVWLQYG 780
  781 QVKLKASGGD GKYTWRSANP KIASVDSTGQ VTLRDKGTTT ITVVSGDNQT ATYIIATPNS 840
  841 LIVPNIKNRM TYNDAVSSCQ SLGGRLPSSQ SELANVFNTW GAANKYEHYN ASTTIISWVK 900
  901 QTEEDMKKGV ADTYDLVNQN PLNGIVNTKK PNAYATCVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle