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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56900932
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEACNCIEPQ WPADELLMKY QYISDFFIAL AYFSIPLELI YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFTMHS RTVAIVMTTA KVLTAAVSCA TALMLVHIIP DLLSVKTREL 120
  121 ILKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA 180
  181 LWMPTRSGLE LQLSYTLRQQ NPVGYTVPIQ LPVINKVFSC NRAVKISPNC PVARIRPFAG 240
  241 KYMPGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHA YELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH 360
  361 AIIALSSLLQ ETGLTPEQRL MVETILKSSN LLATLINDVL DLSRLEDGSL QLDLGTFNLR 420
  421 AVFREVLNLI KPIASVKKLP VTLNLAPDLP EYAIGDEKRL MQTILNVVGN AVKFSKEGNI 480
  481 SITAFVARPE SLRDLRFPDF FPVPSDDHFY LRVQVKDEGL GINLQDIPKL FTKFAQNQSL 540
  541 ATRNSGGSGL GLAICKRFVN LMEGHIWIES EGLGKGCTAI FVVKLAILEC SNESKHPFMQ 600
  601 NGPKPNQGAK QTSFMGPESS LLMDDTGGYQ DGNKRTFWGT LXCDXTTVSS SDECLRVVXL 660
  661 DHKVVFMDVC MPDGLELLSA YMKDFTKRHE RPLIVALYWN ANKVTKENCM KVGMDGVILK 720
  721 PVSVDKMRGV LSDLLEHRVL FEAM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle