YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56971500
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSLGLVMENS QVLPAFLLCS TLLVIKMYAV AVITGQVRLR KKAFANPEDA LKRGGLQYCR  60
   61 SDPDVERCLR AHRNDMETIY PFLFLGFVYS FLGPNPLIAW IHFLVVLTGR VVHTVAYLGK 120
  121 MNPRIRSGAY VLAQFACFSM ALQILWEVAH HL

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.83
Transmembrane Helix	12	34	0.87
Cytoplasmic	35	77	0.85
Transmembrane Helix	78	93	0.85
Non-Cytoplasmic	94	97	0.66
Transmembrane Helix	98	118	0.78
Cytoplasmic	119	127	0.70
Transmembrane Helix	128	146	0.93
Non-Cytoplasmic	147	152	0.57