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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56788965
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWASGKPGR GRQGQPVPWE LRLGLLLSVL AATLAQVPSL DVPGCSRGSC YPATGDLLVG  60
   61 RADRLTASST CGLHSPQPYC IVSHLQDEKK CFLCDSRRPF SARDNPNSHR IQNVVTSFAP 120
  121 QRRTAWWQSE NGVPMVTIQL DLEAEFHFTH LIMTFKTFRP AAMLVERSAD FGRTWRVYRY 180
  181 FSYDCGADFP GIPLAPPRRW DDVVCESRYS EIEPSTEGEV IYRVLDPAIP IPDPYSSRIQ 240
  241 NLLKITNLRV NLTRLHTLGD NLLDPRREIR EKYYYALYEL VIRGNCFCYG HASQCAPAPG 300
  301 APAHAEGMVH GACICKHNTR GLNCEQCQDF YQDLPWHPAE DGHTHACRKC ECNGHSHSCH 360
  361 FDMAVYLASG NVSGGVCDGC QHNTAGRHCE LCRPFFYRDP TKDMRDPAAC RPCDCDPMGS 420
  421 QDGGRCDSHD DPVLGLVSGQ CRCKEHVVGT RCQQCRDGFF GLSASNPRGC QRCQCNSRGT 480
  481 VPGGTPCDSS SGTCFCKRLV TGDGCDRCLP GHWGLSHDLL GCRPCDCDVG GALDPQCDEA 540
  541 TGQCRCRPHM IGRRCEQVQP GYFRPFLDHL TWEAEGAHGQ VLEVVERLVT NRETPSWTGV 600
  601 GFVRLREGQE VEFLVTSLPR AMDYDLLLRW EPQVPEQWAE LELVVQRPGP VSAHSPCGHV 660
  661 LPRDDRIQGM LHPNTRVLVF PRPVCLEPGL SYKLKLKLTG TGGRAHPETP YSGSGILIDS 720
  721 LVLQPHVLML EMFSGGDAAA LERRTTFERY RCHEEGLMPS KTPLSEACVP LLISASSLVY 780
  781 NGALPCQCDP QGSLSSECNP HGGQCRCKPG VVGRRCDACA TGYYGFGPAG CQACQCSPDG 840
  841 ALSALCEGTS GQCLCRTGAF GLRCDHCQRG QWGFPNCRPC VCNGRADECD AHTGACLGCR 900
  901 DYTGGEHCER CIAGFHGDPR LPYGGQCRPC PCPEGPGSQR HFATSCHRDG YSQQIVCHCR 960
  961 AGYTGLRCEA CAPGHFGDPS KPGGRCQLCE CSGNIDPTDP GACDPHTGQC LRCLHHTEGP1020
 1021 HCGHCKPGFH GQAARQSCHR CTCNLLGTDP QRCPSTDLCH CDPSTGQCPC LPHVQGLSCD1080
 1081 RCAPNFWNFT SGRGCQPCAC HPSRARGPTC NEFTGQCHCH AGFGGRTCSE CQELHWGDPG1140
 1141 LQCRACDCDP RGIDKPQCHR STGHCSCRPG VSGVRCDQCA RGFSGVFPAC HPCHACFGDW1200
 1201 DRVVQDLAAR TRRLEQWAQE LQQTGVLGAF ESSFLNLQGK LGMVQAIVAA RNTSAASTAK1260
 1261 LVEATEGLRH EIGKTTERLT QLEAELTDVQ DENFNANHAL SGLERDGLAL NLTLRQLDQH1320
 1321 LDILKHSNFL GAYDSIRHAH SQSTEAERRA NASTFAIPSP VSNSADTRRR AEVLMGAQRE1380
 1381 NFNRQHLANQ QALGRLSTHT HTLSLTGVNE LVCGAPGDAP CATSPCGGAG CRDEDGQPRC1440
 1441 GGLGCSGAAA TADLALGRAR HTQAELQRAL VEGGGILSRV SETRRQAEEA QQRAQAALDK1500
 1501 ANASRGQVEQ ANQELRELIQ NVKDFLSREP PMWPWPCGCF PSVCVSLSFR VCNGHVFMTL1560
 1561 CLALSPCQSV SLSLCPLCSP CPLVTPLCLL ANS

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