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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56122236
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPSCPALLS FTKLSLWWLF LIPAGGEEAK HLPSRAPVDP LSSPSPTALP QGGSHTQAED  60
   61 RLFKHLFRGY NRWARPVPNT SDVVIVRFGL SIAQLIDVDE KNQMMTTNVW LKQEWSDHKL 120
  121 RWNPADFGNI TSLRVPSEMI WIPDIVLYNN ADGEFAVTHM TKAHLFSTGT VHWVPPAIYK 180
  181 SSCSIDVTFF PFDQQNCKMK FGSWTYDKAK IDLEQMEQTV DLKDYWESGE WAIVNATGTY 240
  241 NSKKYDCCAE IYPDVTYAFV IRRLPLFYTI NLIIPCLLIS CLTVLVFYLP SDCGEKITLC 300
  301 ISVLLSLTVF LLLITEIIPS TSLVIPLIGE YLLFTMIFVT LSIVITVFVL NVHHRSPSTH 360
  361 TMPRWVRGAL LGCVPRWLLM NRPPPPLELC HPPGLKLSPS YHWLETNVDV EEQEVVVEEE 420
  421 DRWACAGHMA PSMGTLCSHN HLHSGASSPK AEALLQEGEP LLSPHMQKAL EGVHYIADHL 480
  481 RSEDADSSVK EDWKYVAMVI DRIFLWLFII VCFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle