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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33309998
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTFLGRPEC ILCLSSTLGV MAFLSNNQLP RLNQSHLTPL WLLTRRVGLK VKDSQFTLEG  60
   61 FPFRIISGAI DYFRVPRQNW RQSLRKMQAR GFNTLTTHIP WNLHEPTMGR FQFIENMDLV 120
  121 AFITMASETG LWVILCPGPY IGGDIDLGGL PSWLLKDPKM KLRTTYKGFT KAMNRYFNNL 180
  181 IPRIAQLQYN KGGPIIAVQV ENEYGSYYMD KKYMEYVKTA LVSRGIDELL MTADDGVSLR 240
  241 KGHLQNVLAT VRMKNINKET YEDFKFIQGR SPILMTVYTT NSFDTWGALR QLGDPQMLMK 300
  301 DVREIFNLGF SLNFYMFQGG TNFGLIGGAQ SAEGYTPVVT SYDYCALITE NGDYTPEYQE 360
  361 FQRFFHSVTD FSPLTRPKAT LTFAYQPLTL LYYMTLWEVL PYLVKTTKSS RPLSMEQLTV 420
  421 NGRSGQSFGY ILYETTILNG GLLTSRGHIQ DRAQVFLDKD YVGLLDRSNK ELLPYKDLTK 480
  481 KTQTLRILVE NQGRLTSGQD MNKERKGLTG DIYLDKSPLR PFKIYSLEMG NVFIQREFPK 540
  541 YWKTATSPVM GPAFFLSHLK AGDPPQDTFI QVKDWGKGVI AINGRSLGRY WNIGPQETIF 600
  601 VPGSWLHPGV NTIIMFEELK GGVKIHFTSR AHLGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle