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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148238114, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAQLTDEE LFSELKRSGI MPGPVTDSTR PVYLKKLKKL REEQRLRHGK VRVLTNNTAA  60
   61 APSESEGILK SGGDVTHKRY SRQSPPREPA KQSPILGFSS DESDADAGLG AHGSRRVRAN 120
  121 TPQSERKPGQ LRATADANAD RRKVPGWWEM RRPRGDSEEE EDDEEEEEEE EGTEEASKCR 180
  181 TMNGSRHSYC RDYSDTDEEE LGKDEQQASR RSRRGSSKQA KEQCMDRDDL PTWPGWSREV 240
  241 ADVSPRHRGA ARKSHTAADS DGAGNLKRKN NNHLESGYNK DPPRVYFPSN SLPPRMPQSN 300
  301 HTAAPNHTKY SHYHYPDSKR QHHKVAEPEE ALLQQFKRDE VSAAGRFSAH YLSMFLLTAA 360
  361 CLFFLLLGLT YLRMRGTSLP ANENLTSTED LNVDQSKKNL MNTLQKLHEK LSKTAGDYIC 420
  421 GNTDHRNISV QEAKQYLRTF GQEYENEFNN TLAWILEHSA TRDIGIKCVS DPGSILNITS 480
  481 VKYLESTLPK MSFMCRIKRA VITVAHRSSI LLVGVGVLFG VWRYIKYRWA KEEEETKQMY 540
  541 DMVVKIIDVL KSHNEACQEN KGLEPYTPIP HVRDSLILPQ DRKKMKKVWD RAVEFLDANE 600
  601 SRVRTETQKI GGADFQVWKW IQPSSTCDKI SVMPSKVWQG QAFHLDRRNS PPNSLTPCLK 660
  661 IRNMFDPVME IGDHWDLAIQ EAILEKCSDN EGIVHIAVDK NSREGCVYVK CLSPEFAGKA 720
  721 FKALHGSWFD GKLVTVKYLR LDRYHHRFPQ ALTCSTPLKP SNTHMNSLLH LNLRTGTSNS 780
  781 QSCS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle