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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56566240
Protein type: Globular with Signal Peptide
Type Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPGVLHRRF LNDLSTSLFS FVLPLLPPSE ELSVKEEVRC LIEKLIKGLE PSARLLSFGS  60
   61 SCNSFGLRNS DMDLVVLIDD PSAKIDPGNF VESMAALLER ETNFNVKPLP RARIPILKLE 120
  121 LAPSPALPFG IACDIGIENR LAIENTRLLL TYATIDPARV RTLVLFLKVW SKRRRINSPY 180
  181 RGTLSSYGYT LMVLYFLVHV KQPPVLPNLQ RIMPMRPLEE EEVMLEGRNV YFFDDVETLR 240
  241 REWSSVNFES VGELLVDFFR YFSHDFQFNN SVLSLRAGQL TKESKGWVND IDVGGLNEMA 300
  301 RDRNRLCIED PFEITYNVAR TVTKDGLYTI RGEFMRATRI LTQRPERAVL ALAELCRERE 360
  361 DELQRAPRSS SPAPRALSAA RSNFTGAHAP SAWRSHSQAP FDRLTPSGVH ESHGRKGDDD 420
  421 IPEYSAQDLW LQSQGANLGG VQVGGLGFGF DDLGLHGARG RDTVARGLDT PSGAYRNNPS 480
  481 ARRSASAYEG NAAPTSGTIS APLSPQRMYA QLELGKGIGT GLGSQQLWAS YDPRLHASAG 540
  541 MPMSMSGPSS LRSQSQQGTS RSVSGPNPGV PASAGGSSRG RAMPGMVLSS SIGIDSSSSL 600
  601 HTFAPFDTGP IPSASKAVGI SAVAPAPGLT GAPGPAPHRA VANTTGNGSA VNFISPSTLL 660
  661 SPSTGASALP ETQAVGVRGM DALVGNFGEL IVSGTGTINH PPTVATSSAG IVGEKTDHPD 720
  721 PAVEKRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle