YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56417588
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVSSAARIA PVARNLVLNG TKAYLRPLSS AVISQSQTLA AQNSTPVALL PQVRSFQTSQ  60
   61 VSRDIDSAAK FIGAGAATVG VAGSGAGIGT VFGSLIIGYA RNPSLKQQLF SYAILGFALS 120
  121 EAMGLFCLMM AFLLLFAF

Type	Start	End	Confidence
Cytoplasmic	1	70	0.75
Transmembrane Helix	71	97	0.82
Non-Cytoplasmic	98	111	0.65
Transmembrane Helix	112	136	0.90
Cytoplasmic	137	138	0.64