YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KRBBC_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTAVVYADL HLARTGEPKR ESPPSLSPDT CQCPRWHRLA LKLGCACFIL LVLSVIGLGV  60
   61 LVLTLLQKPL LQNSPADVQE NRTKSTDSPA KLKCPKDWLS HRDKCFHVSQ TSNSWKESLA 120
  121 DCDGKGATLL LIQDQEELRF VRNLTKGKDR SFWIGLSYTL PDRNWKWING STLNSDVLSI 180
  181 TGDTEKGSCA SVSQDKVLSE SCDSDNIWIC QKELKRESTC NDS

Type	Start	End	Confidence
Cytoplasmic	1	43	0.97
Transmembrane Helix	44	65	0.95
Non-Cytoplasmic	66	223	0.99