YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KRBBB_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTAVVYADL HLARTGEPKH KSPPSLSPDT CQCPRWHRLA LKLGCACLIL LVLSVIGLGV  60
   61 LVLTLLQKPL IQNSPADVQE NRTKTTDSPT KLKCPKDWHS HQDKCFHVSQ APNTWNKSLA 120
  121 DCGGKGATLL LIQDQEELRF LRNLTKGKDR SFWIGLNYTL PDKNWKWINS STLNSDVLSI 180
  181 FGDTKQNSCA SISQDKVLSE SCDSDNLWIC QKELKCECMC NGS

Type	Start	End	Confidence
Cytoplasmic	1	42	0.97
Transmembrane Helix	43	65	0.93
Non-Cytoplasmic	66	223	0.99