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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55831991
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGTIGQAKM KFSRMVNSRS YSRFNQSQNP DGDGSRVEVK LAVDGEEEEM DGTELGNMQQ  60
   61 ETYTRSTGRS EPLNKYRILV CVGAALLVFL VGLLIGYSVH RKSDNKSEPL ETPCSKEIQA 120
  121 EEPDPPQYEP IVPSIDWSDI VKLLNDKLSS KSIEEQLSVY SQIGRSAGSS VDNKLGDTIH 180
  181 DAFTKLNMEP WVDEHYVKLQ NPDSSNPNKV WFGNEEIGSP KGFLAYSETG RREGRVVYAN 240
  241 YGEPADLQAV QANEVSLNGT VVLMRAGRIS MAQKVMNVAK LGAVAALIYP DPADYDGMDT 300
  301 ELYGHVHLGS GDPYTPGFPS FNHTQFAPAK SSGLPEILAQ TIPASMARKI LSKMGGSEVP 360
  361 SKFKGGFTSY KFGDESNKVA LSINNKLVDT KIHNVFGVIK GYVDPDRYVV IGAQRDSMTS 420
  421 GYAKSAVGTT LLMELARVFN ELKKEGFKPK RSIVFASWTA GDFGKVGATE WLEGYWASLD 480
  481 RKAFTYISLD GVVSGKDSLR ASASPLLHTL LQKTLEKVKA PMLSYGSDFS SILTNMQMDD 540
  541 GAYPFLTFSG IPSVSFSFIS SRTTPDYKYF GTEMDTKERL DSVTGQQVVE LSMLAAQVAG 600
  601 QMALRLVHDQ ILRLDVTKYG GVIESHVKNI IHHVNVLKSE KVEKIETLST EWLIAAKSSY 660
  661 SRAATKLNND IKNSDLEDME MCRIINNRIM KVEHNFLSPY VSIRDFPFRH IFFGNGWQTA 720
  721 TDLENYLQDV RDKKASFDID QVLNKFALLT WSIQGCANDL AGDIWSLDNE I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle