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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55793317
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNIDTRNHRI IKGPRQTQFG YTVQQHIAGG QKWLLVGAPL ETNGQHQTGD VYKCPLSRRS  60
   61 GGPSCSKLNL GKISLTNVSE RKERMRLGMT LSSNPKDNSF VACGPLWSYE CGSSYYSTGI 120
  121 CSRVNASFKF SRTIAPAFQR CETYMDIVIV LDGSNSIYPW NEVQDFLINI LRKFYVGPGQ 180
  181 IQVGVLQYGE KVVSEFQLND FRSVEDVVKA ARKIGQRGGE ETNTALGINV ARSEAFKQGG 240
  241 RRGAKKVMIV ITDGESHDSA DLQQVIEESE KDGITRYAIA VLGYYNRRGI NPEAFLNEIK 300
  301 YIASDPDDKH FFNVTDEAAL KDIVDALGER IFSLEGTSKN GTAFGLQMSQ AGFSTHTVED 360
  361 GILVGAVGAY DWNGAVLKET RQGKVVPPKS SYEQEFPEEL KNHGAYLGYT VTSVVSARSG 420
  421 QLYVAGAPRF NHTGKVIIFT LKNTGELTIL HSLKGQQIGS YYGSEIAPVD IDNDGVTDNL 480
  481 LVAAPMFFSG GWEKGKVYIY RVTEQPRFIL EGSLEVLDQG QNARFGSALA PVPDLNGDSF 540
  541 NDVVVGAPLE DDHKGAIYIY HSQRNRILRK YKQRIGAVQL GPGLQYFGRS IHGKMDMNGD 600
  601 DLVDLAVGSL GAAVLLWSRS VIRINSVVRF EPSKINIFNK DCRRGGKDVT CMSAIVCLNV 660
  661 TARTPINPSQ EIALRYSAFF EEKRFNPRAV FDDPDRQQPQ NLTLLPGEET CDHIYFHVME 720
  721 TTDYARPIIF TVETELLDLY HGPVLDDSWP TTVKTQLPFW NGCDEDDHCV PDLVLQAHTD 780
  781 LMNRQQFCGQ AFRAASLLCQ GHTSTDPSER IIEGSRRKMV VDVRLENRGE NAYGAKLNIT 840
  841 YTQNLRFSSL IVKDNSDIHI DCRNENKRKY EKTCNISEPF MRAKSQVIFR LEFEFSHSVL 900
  901 LDHVRIILEV TSEGEEVILY DNSNEIFYNL KYEADLLFTR DFYPTRYELK PDLSLEKADD 960
  961 FNPPFNFTFQ IQNLGYFPIQ DLQLYIAIPE VTKNGNQLLQ IRDFHIDQIG GSQCIPPQHV1020
 1021 AHSRASPEDL SRTSRLNYSN TLAVPVQCTV NLPSYRDVSV KIGGSLRTDA LHALKFKTLE1080
 1081 LVTTASVELN PSSPMFLPEE RPVRHIILEI RKEEDYRVPI WIIIGSTLGG LLLLSLLILA1140
 1141 LWKLGFFQRQ KRREEAENEV NGKTMEER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle