YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55740402
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQITLIFLL GAVLVQLSAA LSLTNLLADE WHLFKATHKK EYPSQLEEKF RMKIYLENKH  60
   61 KVAKHNILYE KGEKSYQVAM NKFGDLLHHE FRSIMNGYQH KKQNSSRAES TFTFMEPANV 120
  121 EVPESVDWRE KGAITPVKDQ GQCGSCWAFS STGALEGQTF RKTGKLISLS EQNLIDCSGK 180
  181 YGNEGCNGGL MDQAFQYIKD NKGIDTENTY PYEAEDDVCR YNPRNRGAVD RGFVDIPSGE 240
  241 EDKLKAAVAT VGPVSVAIDA SHESFQFYSK GVYYEPSCDS DDLDHGVLVV GYGSDNGKDY 300
  301 WLVKNSWSEH WGDEGYIKIA RNRKNHCGVA TAASYPLV

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	338	0.99