YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79332834, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.36
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASEHRCVG CGFRVKSLFI QYSPGNIRLM KCGNCKEVAD EYIECERMII FIDLILHRPK  60
   61 VYRHVLYNAI NPATVNIQHL LWKLVFAYLL LDCYRSLLLR KSDEESSFSD SPVLLSIKVL 120
  121 IGVLSANAAF IISFAIATKG LLNEVSRRRE IMLGIFISSY FKIFLLAMLV WEFPMSVIFF 180
  181 VDILLLTSNS MALKVMTEST MTRCIAVCLI AHLIRFLVGQ IFEPTIFLIQ IGSLLQYMSY 240
  241 FFRIV

Type	Start	End	Confidence
Cytoplasmic	1	64	0.61
Transmembrane Helix	65	82	0.36
Non-Cytoplasmic	83	116	0.72
Transmembrane Helix	117	138	0.90
Cytoplasmic	139	150	0.70
Transmembrane Helix	151	171	0.80
Non-Cytoplasmic	172	175	0.56
Transmembrane Helix	176	196	0.67
Cytoplasmic	197	203	0.55
Transmembrane Helix	204	238	0.65
Non-Cytoplasmic	239	245	0.52