YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79318789
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAQDPFYI VKEEIQDSVS CSEIARDIDK LQSTFHKWER ISPDMGDQAH VAKELVATCG  60
   61 SIEWQVLVFS HAVFTDRKVD ELEKAITVAA KDPSWYGIDE AELEKRRRWT SNARTQVRNV 120
  121 KSGVLAGKVS SGAGHASEVR RELMRMPNSG EASRYDQYGG RDDDGFVQSE SDRQMLLIKQ 180
  181 QDEELDELSK SVQRIGGVGL TIHDELVAQE RIIDELDTEM DSTKNRLEFV QKKVGMVMKK 240
  241 AGAKGQMMMI CFLLVLFIIL FVLVFLT

Type	Start	End	Confidence
Cytoplasmic	1	244	0.98
Transmembrane Helix	245	266	0.91
Non-Cytoplasmic	267	267	0.99