YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56269456
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNKLKKDHA FWAAVCLLLS IVPELLNALP EEDDDTINTD SELRPMKPLH TFCAMKAEDG  60
   61 PCKAMIRSYY FNMNSHQCEE FIYGGCRGNK NRFDTLEECR KTCIPGYKKT TIKTTSGAEK 120
  121 PDFCFLEEDP GICRGFMTRY FYNNQSKQCE QFKYGGCLGN SNNFETLEEC RNTCEDPVNE 180
  181 VQKGDYVTNQ ITVTDRTTVN NVVIPQATKA PSQWVTKEET NGGWKNADCT YQGSLSSFYI 240
  241 HVLGFFVFRI G

Type	Start	End	Confidence
Signal Peptide	1	28	0.98
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	251	0.99