YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56417377
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGLQRFLI SMSCEAGTPH WTLTAVVLLG FLLGIVSAYP LPSSRTNATL LEKRWETLFS  60
   61 RSVLGISGEK PELNWESDYL LGIKRVRRLY CNVGIGFHLQ ILPDGRINGA HNENQYSLIE 120
  121 ISTVERGVVS LYGVKSEMFV AMNSRGRLYG TTVFHDECKF KESLLANNYN AYESLVYRGS 180
  181 YIALSKHGRV KRGNKATTAM TVTHFLPRI

Type	Start	End	Confidence
Cytoplasmic	1	20	0.73
Transmembrane Helix	21	41	0.83
Non-Cytoplasmic	42	209	0.91