YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56562213, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSQRFYWLC LVLLSVCLLL WYRYMMRSGF AMKTGLQGYV RIHPKTRLKS NLLDFHCGRC  60
   61 AVVSSSGQML GGGRGPEIDQ QDCVIRMNVA PTAGYEADVG NRTSLRVVSH TSVPLLVRQQ 120
  121 GYFFRREADT KYVIWGPEKN MRQDGKGKTF NALVTLAKKY PHSHVHTITR EKVQYCDGVF 180
  181 QNETGKNRMK SGAFLSTGFF TMILALEVCD SILVYGMIDG SYCSNANHSF VPYHYYEPLH 240
  241 LDECRMYRVH EHAKRGGHRF ITEKLIYSRW ASQGKLRFVY PPWTSQEHQP P

Type	Start	End	Confidence
Signal Peptide	1	31	0.62
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	291	0.85