YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55859517
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLRTTVQL KRHFRYITAF LSSTTILLFL YFQNSAVITT YASYGIASKR AACGCNTCVA  60
   61 SRENGTWFSE RYNRTIPFLL NSTNSELNED ILKWWKGLQG AADVINYTYV VDILFSLFPD 120
  121 EDHFSDAGPD RCRTCAVVGN SGNLLRSNYG RLIDLHDFVL RINKGPTKGF EKDVGSKTTH 180
  181 RIMYPESAVD LDNSTHLVLF PYKILDMQWL ISIFTTKHIT RTYMSVPSTI NADRDKVMIL 240
  241 HPEFIKYVND KWAEGHGGYP STGFLTLIFA LHICDEVNVF GFGATSEGQW HHYFDDSMTS 300
  301 FSNLHGGDFE NQTIHFLHQQ NKISLHKGWT

Type	Start	End	Confidence
Signal Peptide	1	35	0.50
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	330	0.98