YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55859515, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPFSRFPYV TALFSCGIFL LFIFLQNTVI YNSLQTVYST GGLCACNKCV MDLNDEDWFF  60
   61 IRFNPTVPTL LNRRNSAMRS DVFEWWQGLQ SDSQKANFSD VVDILFSLFP DEEHYVVTDP 120
  121 NRCRICAVVG NSGNILGSHY GQLIDSHDFV IRINKGPTKG YETDVGSKTT HRIMYPESAM 180
  181 DLDNSTHLVL LPFKVKDMQW LISVFTTKHI TSTYLKVRPT INADREKVMI IHPAFIKYVY 240
  241 ESWLRKHGSY PSTGFITLIF ALHICDQVSV FGFGAKLDGN WHHYFDESLA HFNRGRHGGD 300
  301 YENRTIHKLL LMNKIALHKG L

Type	Start	End	Confidence
Cytoplasmic	1	6	0.80
Transmembrane Helix	7	30	0.78
Non-Cytoplasmic	31	321	0.89