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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GGNB1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQARTPRS RILGCSSMLR FLRSLVGSKG SSKSSNRPLN RSQPSSSPEQ DVVSPTMGHQ  60
   61 GGCGRKETRP RVLSATSSNG KREPRPRVLS AAPSNQRLRD ASGLGTGDTG SQTLTSKDVL 120
  121 KLRAQGVEVT SVPTRGTWEV LEHLPEKKGE EGEPAGEVSG ASDRAHFGQA LEAEQGCLQW 180
  181 VSGPMVLPPE AFIKEEEDEH CLIDFGDLRL SSCKVGSTPW NYLLGLYKQL QKSAMTKAQR 240
  241 PDADAPQFAL KDSSPTEERG EREEAVDESS LKWCAPRASS DDSNLKWCAP RNSTYQSPLQ 300
  301 KTFRSTDTVG FVESELKKIL AVQREARLWK VGNPEGRELL TQPDITLEEA GMVDGQHLLL 360
  361 EEMDEMGNWP PPE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle