YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58979188
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSNQAAVSF LTNLARAAFG LGISATVVNS SLYTVDGGQR AVLFDRFRGV IDDTVGEGTH  60
   61 FLIPWLQKPF IFDIRTRPHT FSSTSGTKDL QMVNLTLRVL SRPEVARLPD IFKTLGLEYD 120
  121 EKVLPSIGNE VLKAVVAQFN ADQLLTERPQ VSALVRESLI RRAKDFNIVL DDVAITHLSY 180
  181 GAEFSKAVEQ KQVAQQEAER SKFVVMKAEQ ERRAAIIRAE GESESAKLIS DATAAAGMGL 240
  241 IELRRIEASR EVAATLAKTP NVAYLPKQGN MLLGLNASR

Type	Start	End	Confidence
Signal Peptide	1	17	0.90
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	279	0.98