YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67845232
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPCSSLFSY VFMHLFVLCL QAQVTVQSPP NFTQHVREQS LVTDQLSRRL VRTYQLYSRT  60
   61 SGKHVQILDN KKINAMAEDG DVHAKLIVET DTFGSRVRIK GAATGFYICM NKKGKLIGKS 120
  121 NGKGKDCVFT EIVLENNYTA LQNAKYEGWY MAFTRKGRPR KGSKTRQHQR EVHFMKRLPK 180
  181 GHQTTEPHRR FEFLNYPFNR RSKRTRNSSA RVRP

Type	Start	End	Confidence
Signal Peptide	1	22	0.61
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	214	0.98