YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60730001, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEVRIRPRQ VLILIIVFLV VLMMVHRNGK RTCQGPEYLQ AMFVQADTLP TIYAVTPTYP  60
   61 RPAQKAELTR LSHLFMLLPH LHWIIVEDTN ATTSLVRNLL DRAGLEKRST LLNIKTPSEF 120
  121 KLKGKDPNWI KPRGVEQRNL ALAWLRSHVD DDRHSIVFFM DDDNSYSTEL FAEMSKIGRG 180
  181 RVGVWPVGLV GGLMVERPLL TEDGTKVTGF NAAWRPERPF PIDMAAFAIS MDLFIRNPQA 240
  241 TFSYEVQRGY QESEILRHLT TRDQLQPLAN KCTDVLVWHT RTEKTKLAAE EALLKKGQRS 300
  301 DGGMEV

Type	Start	End	Confidence
Signal Peptide	1	27	0.74
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	306	0.98