YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57284205, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNYADLSDT ELTTLLRRYN IPHGPVVDLN STRGDADMYD LPKKEDALLY QSKGYNDDYY  60
   61 EESYFTTRTY GEPESAGPSR AVRQSVTSFP DADAFHHQVH DDDLLSSSEE ECKDRERPMY 120
  121 GRDSAYQSIT HYRPVSASRS SLDLSYYPTS SSTSFMSSSS SSSSWLTRRA IRPENRAPGA 180
  181 GLGQDRQVPL WGQLLLFLVF VIVLFFIYHF MQAEEGNPF

Type	Start	End	Confidence
Cytoplasmic	1	189	0.73
Transmembrane Helix	190	211	0.92
Non-Cytoplasmic	212	219	0.83