YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57209530
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSCGSMLGL CGQRLPAAWV LLLLPFLPLL LLAAPAPHRA SYKPVIVVHG LFDSSYSFRH  60
   61 LLEYINETHP GTVVTVLDLF DGRESLRPLW EQVQGFREAV VPIMAKAPQG VHLICYSQGG 120
  121 LVCRALLSVM DDHNVDSFIS LSSPQMGQYG DTDYLKWLFP TSMRSNLYRI CYSPWGQEFS 180
  181 ICNYWHDPHH DDLYLNASSF LALINGERDH PNATVWRKNF LRVGHLVLIG GPDDGVITPW 240
  241 QSSFFGFYDA NETVLEMEEQ LVYLRDSFGL KTLLARGAIV RCPMAGISHT AWHSNRTLYE 300
  301 TCIEPWLS

Type	Start	End	Confidence
Signal Peptide	1	40	0.94
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	308	0.99