YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55957843
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRLCDVAS LLRSGSWAAE PWTGVIAAME TQLSNGPTCN NTANGPTTIN NNCSSPVDSG  60
   61 NTEDSKTNLI VNYLPQNMTQ EELKSLFGSI GEIESCKLVR DKITGQSLGY GFVNYIDPKD 120
  121 AEKAINTLNG LRLQTKTIKV SYARPSSASI RDANLYVSGL PKTMTQKELE QLFSQYGRII 180
  181 TSRILVDQVT GISRGVGFIR FDKRIEAEEA IKGLNGQKPP GATEPITVKF ANNPSQKTNQ 240
  241 AILSQLYQSP NRRYPGPLAQ QAQRFRLDNL LNMAYGVKRF SPMTIDGMTS LAGINIPGHP 300
  301 GTGWCIFVYN LAPDADESIL WQMFGPFGAV TNVKVIRDFN TNKCKGFGFV TMTNYDEAAM 360
  361 AIASLNGYRL GDRVLQVSFK TNKTHKA

Type	Start	End	Confidence
Signal Peptide	1	18	0.92
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	387	0.99