YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|64966503
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFEFRILMF GIGTALVIFV IIADISEVEE EIANIEDSRK FHLKSVALQS NRSSDLNAAP  60
   61 TSLVTYRKSK VSSLASPSDI KRKTSNSSSS EWTFNRTLSN LIRKNILKFL DAERDISILK 120
  121 STFKPGDVIH YIFDRQSTTN ISENRYHLLP TVSPMKNQHY RXXKCAIVGN SGILLNSSCG 180
  181 REIDSHDFVI RCNLAPVEEY AADVGLRTSL VTMNPSVVQR AFQDLNSEEW VQRFVQRLQS 240
  241 LSGSVLWIPA FMAKGGEERV EWAIRLILLH TVNVRTAFPS LRLLHAVRGY WLTNHVQIKR 300
  301 PTTGLLMYTM ATRFCDEIHL YGFWPFAHDP DGKPVKYHYY DTLTYHYTSS ASPHTMPLEF 360
  361 RTLSALHRQG ALRLHTGPCK PPT

Type	Start	End	Confidence
Cytoplasmic	1	6	0.67
Transmembrane Helix	7	25	0.73
Non-Cytoplasmic	26	383	0.97