YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63086914
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAIKIAGFV LTFLSTLLAK RLTVSNSLNF VNNAPKQLQK RSPQKLRATE YKLDNRTIRG  60
   61 PLSPINEYIL IQKNDAHDTT EAGVFIGDTL KKNQYVGKVL AVGTGIVNPK NGQRVPIDVE 120
  121 IGDLVIFNPS DGNKLKYNDK DCLLISNEEI LGKINDSSME VNPENITPFY DRVLIKLVNQ 180
  181 NINSDSLIIM PESQNNEKSC DGLVVATGSG NYDEHNNKIP LDIRINDYIK FSPFSNESCE 240
  241 FTYKNEKYTF VKARYIMAKY

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	260	0.99