YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|131888679, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFQIEAPEI EIPEIEVPDV EFCEEMDVDC EMEADNAEGN EGGIEVEFEI KKRPCQTPRN  60
   61 PNQKIQHKSQ SPRKVNVKDY LCFSVLSITL FNSLFLGTAA MCFSLKALNR KLKRDVKGAK 120
  121 KFSCLALAAN ICAVLATIST IIGVAVAISL THYGHHKRGQ CYVI

Type	Start	End	Confidence
Non-Cytoplasmic	1	84	0.76
Transmembrane Helix	85	105	0.84
Cytoplasmic	106	123	0.73
Transmembrane Helix	124	148	0.88
Non-Cytoplasmic	149	164	0.76