YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MYCT1_DANRE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNSTHPIM KILESFGLTD VILAFFLSMV VGLLLGALVY MILTWMSRRR ASATITRIPV  60
   61 HQSRSTTRSS SPRSRLGYSR HSSGYDRRSN NSLASAAFSF HRQTSSSPID YGDSTGRKSS 120
  121 FRASTFHPLL QCSQIAREAE EGAQGSLPRT PTLTTSPGAA GSTSTVSSMI TPPRARNRPD 180
  181 SFWGNSNLRG FHAGQTPPPA YDSIIRAYQE TTT

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.80
Transmembrane Helix	21	43	0.95
Cytoplasmic	44	213	0.81