YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|121582394, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMRLKLKTV FVLYFMVSLF GLLYALMQLG QRCDCRDHEQ SKDQQISQLK GELQKLQEHI  60
   61 KTSELSKKTD VPRIYVITPT YSRLVQKAEL TRLAHTFLHV PQLHWIVVED APQQTQLVSD 120
  121 FLSASGLTYT HLNKLTPKER KLQEGDPNWL KPRGAEQRNE GLRWLRWMGS TVHGKEAAAL 180
  181 EEAVVYFADD DNTYSLQLFE EMRSTRRVSV WPVGLVGGRR YERPLVEKGK VVGWYTGWKA 240
  241 DRPFAIDMAG FAVSLQVILS NPRALFKRRG AKPGMQESDF LKQITKVEDL EPKAKNCTQV 300
  301 LVWHTRTEKV NLGNEPKRQQ DSVFIEV

Type	Start	End	Confidence
Signal Peptide	1	25	0.55
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	327	0.98