YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61845111
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNENGGHYCS KKSDDICNSI NLQDSGRILS MSRIRCILRG MDLKTYLLLF ILVPTCVYGI  60
   61 YMHGQKISSF FRPLWESPPK TFNEIPHYYH ENVSMENLCK LHGWGIREFP RRVYDAVLFS 120
  121 NELDILALRW KELYPYITQF VLLESNSTFT GKEKLLSFAN HRDQFKFVEP RLTYGTIGGR 180
  181 FKKGENPFIE EAYQRVALDQ LIKVAGISDD DLLIMSDVDE IPSRHTINLL RWCDDTPSVL 240
  241 HLRLKNYLYS FEFLKDIKSW RASVHRYQTG KTRYAHYRQA DDILADAGWH CSFCFRRISE 300
  301 FIFKDEAYSH VDKSRVQRYL NPKRIQRVIC KGADLFDMLP EEYTFKEIIG KMGPIPHSYS 360
  361 AVHLPSYLLE KADKYKFLLP GNCLRESG

Type	Start	End	Confidence
Cytoplasmic	1	42	0.97
Transmembrane Helix	43	64	0.90
Non-Cytoplasmic	65	388	0.99