YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61889368
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANCKNPRP KAGAYRRFLS LVLVTLIGLL LLVVLLGTNS VSNVVSQSPN ESSVKDLRPR  60
   61 YNYTDYRLIP NLPIQSELSI QLEKLNQLRP RNTDLYPKLA KNHITIVLYV HNRPQYLKVV 120
  121 VESLSKVVGI SETLLIVSHD GYFEEMNKIV EGIKFCQVKQ IFAPYSPHVF PDSFPGVSPN 180
  181 DCKDKDDAAK KHCVGKPDQY GNHRSPKIVS LKHHWWWMMN TVWDGLKETE GHTGHILFIE 240
  241 EDHFIFPNAY RNLQKLAALK PKLCPDCYAA NLAPSDVNSR GENWDCLIAE RMGNVGYSFN 300
  301 RTVWRKIHTK AREFCLFDEY NWDITMWATV YPSFGGPVYT LRGPKTSAVH FGKCGLHQGH 360
  361 GEKGVCIDNG AVNIAVEDVD KVVNINSKWE VRFSENQPGY KAGFKGWGGW GDERDRALCL 420
  421 KFAEMHHFTS TDSVLSSDD

Type	Start	End	Confidence
Signal Peptide	1	46	0.84
N-region	1	37
H-region	38	43
C-region	44	46
Cleavage Site	46	47
Non-Cytoplasmic	47	439	0.99