YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66911177, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVCIIGAGV IGLSTAQSIY QHFHSRVSPL TIEVYADIFT PLTTSDGAAG FWQPYLYDNG  60
   61 NVKETQWNKE TFDYLLSFLN SPDSIKMGIF LESGYNLCFE PMPEPSFKQA VLGFRQLSKR 120
  121 ELEMFPGFSF GWFNTALVIE GKSYLPWLMD WLNQRGVKFF QRKIDSFKEL SDSGADMIIN 180
  181 CSGVRSGELQ PDPELQPARG QIIKVDAPWL KHWVITHDSK LGTYNTPYLI PGSRLVTVGG 240
  241 VFQVGNWNRM NSSVEHKQIW EGACKLEPSL QHARIVEDWT GLRPARSKVR LERESIRCGG 300
  301 HSFEVIHNYG HGGFGLTIHR GCAEEAARLF GQFLEQKGLL TSQAKSRL

Type	Start	End	Confidence
Signal Peptide	1	18	0.90
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	348	0.99