YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76253841, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDGCRPCVF IWAVLLLLPS VIMAYRPVIL VHGLFGGPEQ MEMLKKYIKR SHPGTSVTAI  60
   61 SLYNDNASLK PMWEQVDGFR EAIRPIMERA KDGVHLICYS QGGLICRGVL ATLPHHNVHS 120
  121 VIFLSSPLAG QYGDSNYISK FFPSLVKSTL YNGCYTTRGQ KISSCSYWKD PHQIEKYLKY 180
  181 SVFLAPLNGE VETVHTKAWR KNFLRIKTMV LLGGPDDGII KPWQSSMFGF YNRNEKVINM 240
  241 EHQDYYISDS FGLKTLNRRK AIVKCIVPGV KHDAWTTNHK IYKKCIERWL T

Type	Start	End	Confidence
Signal Peptide	1	24	0.92
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	291	0.99